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RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria 2024 Laboratoř mikrobiální genetiky a genové exprese Vaňková Hausnerová V.Shoman M.Kumar D.Schwarz M.Modrák M.Jirát Matějčková J.Mikesková E.Neva S.Herrmannová A.Šiková M.Halada P.Novotná I.Pajer J.Valášek L.Převorovský M.Krásný L.Hnilicová J.Nucleic Acids Research. 2024; 52(May 8); 4604-462610.1093/nar/gkae081
Selective footprinting of 40S and 80S ribosome subpopulations (Sel-TCP-seq) to study translation and its control 2022 Laboratoř regulace genové expreseWagner S.Bohlen J.Herrmannová A.Jelínek J.Preiss T.Valášek L.Teleman A.Nature Protocols. 2022; 17(10); 2139-218710.1038/s41596-022-00708-4
Selective Translation Complex Profiling Reveals Staged Initiation and Co-translational Assembly of Initiation Factor Complexes 2020 Laboratoř regulace genové expreseWagner S.Herrmannová A.Hronová V.Gunišová S.Sen N.Hannan R.Hinnebusch A.Shirokikh N.Preiss T.Valášek L.Molecular Cell. 2020; 79(4); 546-56010.1016/j.molcel.2020.06.004
Adapted formaldehyde gradient cross-linking protocol implicates human eIF3d and eIF3c; k and I subunits in the 43S and 48S pre-initiation complex assembly; respectively 2020 Laboratoř regulace genové expreseHerrmannová A.Prilepskaja T.Wagner S.Šikrová D.Zeman J.Poncová K.Valášek L.Nucleic Acids Research. 2020; 48(4); 1969-198410.1093/nar/gkz1185
uS3/Rps3 controls fidelity of translation termination and programmed stop codon readthrough in co-operation with eIF3 2019 Laboratoř regulace genové expresePoncová K.Wagner S.Jansen M.Beznosková P.Gunišová S.Herrmannová A.Zeman J.Dong J.Valášek L.Nucleic Acids Research. 2019; 47(21); 11326-1134310.1093/nar/gkz929
