RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria 2024 Laboratoř mikrobiální genetiky a genové exprese Vaňková Hausnerová V.Shoman M.Kumar D.Schwarz M.Modrák M.Jirát Matějčková J.Mikesková E.Neva S.Herrmannová A.Šiková M.Halada P.Novotná I.Pajer J.Valášek L.Převorovský M.Krásný L.Hnilicová J.Nucleic Acids Research. 2024; 52(May 8); 4604-462610.1093/nar/gkae081
The genus Arachis: an excellent resource for studies on differential gene expression for stress tolerance 2023 Laboratoř post-transkripční kontroly genové exprese Kumar D.Kirti P.Frontiers in Plant Science. 2023; 14(October); 127585410.3389/fpls.2023.1275854
Avirulent phenotype promotes Bordetella pertussis adaptation to the intramacrophage environment 2023 Laboratoř post-transkripční kontroly genové exprese Farman M.Petráčková D.Kumar D.Držmíšek J.Saha A.Čurnová L.Čapek J.Hejnarová V.Amman F.Hofacker I.Večerek B.Emerging Microbes & Infections. 2023; 12(1); e214653610.1080/22221751.2022.2146536
Ms1 RNA Interacts With the RNA Polymerase Core in Streptomyces coelicolor and Was Identified in Majority of Actinobacteria Using a Linguistic Gene Synteny Search 2022 Laboratoř mikrobiální genetiky a genové exprese Vaňková Hausnerová V.Marvalová O.Šiková M.Shoman M.Havelková J.Kambová M.Janoušková M.Kumar D.Halada P.Schwarz M.Krásný L.Hnilicová J.Pánek J.Frontiers in Microbiology. 2022; 13(MAY 11 2022); 84853610.3389/fmicb.2022.848536
Comparative Omics Analysis of Historic and Recent Isolates of Bordetella pertussis and Effects of Genome Rearrangements on Evolution 2021 Laboratoř post-transkripční kontroly genové exprese Dienstbier A.Amman F.Petráčková D.Štipl D.Čapek J.Zavadilová J.Fabiánová K.Držmíšek J.Kumar D.Wildung M.Pouchnik D.Večerek B.Emerging Infectious Diseases. 2021; 27(1); 57-6810.3201/eid2701.191541
Transcriptional profiling of human macrophages during infection with Bordetella pertussis 2020 Laboratoř post-transkripční kontroly genové exprese Petráčková D.Farman M.Amman F.Linhartová I.Dienstbier A.Kumar D.Držmíšek J.Hofacker I.Rodriguez E.Večerek B.RNA biology. 2020; 17(5); 731-74210.1080/15476286.2020.1727694
