Structural Characterization of Monoclonal Antibodies and Epitope Mapping by FFAP Footprinting 2024 Laboratoř strukturní biologie a buněčné signalizace Fojtík L.Kalaninová Z.Fiala J.Halada P.Chmelík J.Man P.Kukačka Z.Novák P.Analytical Chemistry. 2024; 96(19); 7386-739310.1021/acs.analchem.3c04161
Stem-loop-induced ribosome queuing in the uORF2/ATF4 overlap fine-tunes stress-induced human ATF4 translational control. 2024 Laboratoř regulace genové expreseSmirnova A.Hronová V.Mohammad M.Herrmannová A.Gunišová S.Petráčková D.Halada P.Coufal .Swirski M.Rendleman J.Jendruchová K.Hatzoglou M.Beznosková P.Vogel C.Valášek L.Cell Reports. 2024; 43(4); 11397610.1016/j.celrep.2024.113976
RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria 2024 Laboratoř mikrobiální genetiky a genové exprese Vaňková Hausnerová V.Shoman M.Kumar D.Schwarz M.Modrák M.Jirát Matějčková J.Mikesková E.Neva S.Herrmannová A.Šiková M.Halada P.Novotná I.Pajer J.Valášek L.Převorovský M.Krásný L.Hnilicová J.Nucleic Acids Research. 2024; 52(May 8); 4604-462610.1093/nar/gkae081
Phlebotomine sand flies (Diptera: Psychodidae) of Bosnia and Herzegovina: distribution; ecology and environmental preferences. 2024 Laboratoř strukturní biologie a buněčné signalizace Hoxha I.Trajer A.Dvořák V.Halada P.Šupić J.Obwaller A.Poeppl W.Walochnik J.Alić A.Kniha E.Acta Tropica. 2024; 260(December 2024); 10739310.1016/j.actatropica.2024.107393
Top-Down Detection of Oxidative Protein Footprinting by Collision-Induced Dissociation;Electron-Transfer Dissociation; and Electron-Capture Dissociation 2022 Laboratoř strukturní biologie a buněčné signalizace Yassaghi G.Kukačka Z.Fiala J.Kavan D.Halada P.Volný M.Novák P.Analytical Chemistry. 2022; 94(28); 9993-1000210.1021/acs.analchem.1c05476
Identification of blood source preferences and Leishmania infection in sand flies (Diptera: Psychodidae) in north-eastern Algeria 2022 Laboratoř strukturní biologie a buněčné signalizace Messahel N.Benallal K.Halada P.Lafri I.Manseur H.Hakem A.Houali K.Harrat Z.Volf P.Dvořák V.Veterinary Parasitology: Regional Studies and Reports. 2022; 31(June 2022); 10072910.1016/j.vprsr.2022.100729
Ms1 RNA Interacts With the RNA Polymerase Core in Streptomyces coelicolor and Was Identified in Majority of Actinobacteria Using a Linguistic Gene Synteny Search 2022 Laboratoř mikrobiální genetiky a genové exprese Vaňková Hausnerová V.Marvalová O.Šiková M.Shoman M.Havelková J.Kambová M.Janoušková M.Kumar D.Halada P.Schwarz M.Krásný L.Hnilicová J.Pánek J.Frontiers in Microbiology. 2022; 13(MAY 11 2022); 84853610.3389/fmicb.2022.848536
Entomological study in an anthroponotic cutaneous leishmaniasis focus in Morocco: Fauna survey; Leishmania infection screening; molecular characterization and MALDI-TOF MS protein profiling of relevant Phlebotomus species 2022 Laboratoř strukturní biologie a buněčné signalizace Mhaidi I.Kbaich M.El Kacem S.Daoui O.Akarid K.Spitzova T.Halada P.Dvořák V.Lemrani M.Transboundary and Emerging Diseases. 2022; 69(3); 1073-108310.1111/tbed.14064
Utilization of Fast Photochemical Oxidation of Proteins and Both Bottom-up and Top-down Mass Spectrometry for Structural Characterization of a Transcription Factor-dsDNA Complex 2022 Laboratoř strukturní biologie a buněčné signalizace Polák M.Yassaghi G.Kavan D.Filandr F.Fiala J.Kukačka Z.Halada P.Loginov D.Novák P.Analytical Chemistry. 2022; 94(7); 3203-321010.1021/acs.analchem.1c04746
Functional expression and characterization of two laccases from the brown rot Fomitopsis pinicola 2021 Laboratoř strukturní biologie a buněčné signalizace Csarman F.Obermann T.Zanjko M.Man P.Halada P.Seiboth B.Ludwig R.Enzyme and Microbial Technology. 2021; 148(AUG 2021); 10980110.1016/j.enzmictec.2021.109801
Phlebotomine sand fly survey in the Republic of Moldova: species composition; distribution and host preferences 2021 Laboratoř strukturní biologie a buněčné signalizace Sulesco T.Kasap O.Halada P.Oguz G.Rusnac D.Grešová M.Alten B.Volf P.Dvořák V.Parasites & Vectors. 2021; 14(1); 37110.1186/s13071-021-04858-4
Ecology; seasonality and host preferences of Austrian Phlebotomus (Transphlebotomus) mascittii Grassi; 1908; populations 2021 Laboratoř strukturní biologie a buněčné signalizace Kniha E.Milchram M.Dvořák V.Halada P.Obwaller A.Poeppl W.Mooseder G.Volf P.Walochnik J.Parasites & Vectors. 2021; 14(1); 29110.1186/s13071-021-04787-2
The Photosystem II Assembly Factor Ycf48 from the Cyanobacterium Synechocystis sp. PCC 6803 Is Lipidated Using an Atypical Lipobox Sequence 2021 Laboratoř strukturní biologie a buněčné signalizace Knoppová J.Yu J.Janouškovec J.Halada P.Nixon P.Whitelegge J.Komenda J.International Journal of Molecular Sciences. 2021; 22(7); 373310.3390/ijms22073733
Access to both anomers of rutinosyl azide using wild-type rutinosidase and its catalytic nucleophile mutant 2021 Laboratoř biotransformacíKotík M.Brodsky K.Halada P.Javůrková H.Pelantová H.Konvalinková D.Bojarová P.Křen V.Catalysis Communication. 2021; 149(JAN 15); 10619310.1016/j.catcom.2020.106193
Chimeric Cellobiose Dehydrogenases Reveal the Function of Cytochrome Domain Mobility for the Electron Transfer to Lytic Polysaccharide Monooxygenase 2021 Laboratoř strukturní biologie a buněčné signalizace Felice A.Schuster C.Kádek A.Filandr F.Laurent C.Scheiblbrandner S.Schwaiger L.Schachinger F.Kracher D.Sygmund C.Man P.Halada P.Oostenbrink C.Ludwig R.ACS Catalysis. 2021; 11(2); 517-53210.1021/acscatal.0c05294
Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase 2020 Laboratoř mikrobiální genetiky a genové exprese Kouba T.Koval T.Sudzinová P.Pospíšil J.Brezovská B.Hnilicová J.Šanderová H.Janoušková M.Šiková M.Halada P.Sýkora M.Barvík I.Nováček J.Trundová M.Dušková J.Skálová T.Chon U.Murakami K.Dohnálek J.Krásný L.Nature Communications. 2020; 11(1); 641910.1038/s41467-020-20158-4
Integrative approach to Phlebotomus mascittii grassi; 1908: First record in vienna with new morphological and molecular insights 2020 Laboratoř strukturní biologie a buněčné signalizace Kniha E.Dvořák V.Halada P.Milchram M.Obwaller A.Kuhls K.Schlegel S.Köhsler M.Poeppl W.Bakran-Lebl K.Fuehrer H.Volfová V.Mooseder G.Ivovic V.Volf P.Walochnik J.Pathogens. 2020; 9(12); 103210.3390/pathogens9121032
The H2O2-dependent activity of a fungal lytic polysaccharide monooxygenase investigated with a turbidimetric assay 2020 Laboratoř strukturní biologie a buněčné signalizace Filandr F.Man P.Halada P.Chang H.Ludwig R.Kracher D.Biotechnology for Biofuels. 2020; 13(1); 3710.1186/s13068-020-01673-4
An integrative approach to identify sand fly vectors of leishmaniasis in Ethiopia by morphological and molecular techniques 2020 Laboratoř strukturní biologie a buněčné signalizace Pareyn M.Dvořák V.Halada P.Van Houtte N.Girma N.de Kesel W.Merdekios B.Massebo F.Leirs H.Volf P.Parasites & Vectors. 2020; 13(1); 58010.1186/s13071-020-04450-2
Sand fly fauna of Crete and the description of Phlebotomus (Adlerius) creticus n. sp. (Diptera: Psychodidae) 2020 Laboratoř strukturní biologie a buněčné signalizace Dvořák V.Tsirigotakis N.Pavlou C.Dokianakis E.Akhoundi M.Halada P.Volf P.Depaquit J.Antoniou M.Parasites & Vectors. 2020; 13(1); 54710.1186/s13071-020-04358-x
Markers of acute toxicity of DDT exposure in pancreatic beta-cells determined by a proteomic approach 2020 Laboratoř strukturní biologie a buněčné signalizace Pavlíková N.Šrámek J.Jelínek M.Halada P.Kovář J.PLoS ONE. 2020; 15(10); e022943010.1371/journal.pone.0229430
Structural Dynamics of Lytic Polysaccharide Monooxygenase during Catalysis 2020 Laboratoř strukturní biologie a buněčné signalizace Filandr F.Kavan D.Kracher D.Laurent C.Ludwig R.Man P.Halada P.Biomolecules. 2020; 10(2); 24210.3390/biom10020242
Plant Nitrilase Homologues in Fungi: Phylogenetic and Functional Analysis with Focus on Nitrilases in Trametes versicolor and Agaricus bisporus 2020 Biotechnologická hala Rucká L.Kulik N.Novotný P.Sedova A.Petrásková L.Příhodová R.Křístková B.Halada P.Pátek M.Martínková L.Molecules. 2020; 25(17); 386110.3390/molecules25173861
Upregulation of vitamin D-binding protein is associated with changes in insulin production in pancreatic beta-cells exposed to p;p ‚-DDT and p;p ‚-DDE 2019 Laboratoř strukturní biologie a buněčné signalizace Pavlíková N.Daniel P.Šrámek J.Jelínek M.Šrámková V.Němcová V.Balušíková K.Halada P.Kovář J.Scientific Reports. 2019; 9(DEC 2); 1802610.1038/s41598-019-54579-z
A survey of sand flies (Diptera; Phlebotominae) along recurrent transit routes in Serbia 2019 Laboratoř strukturní biologie a buněčné signalizace Vaselek S.Dvořák V.Hlaváčková K.Ayhan N.Halada P.Ivovic V.Ozbel Y.Charrel R.Alten B.Petric D.Acta Tropica. 2019; 197(SEP 2019); UNSP 10506310.1016/j.actatropica.2019.105063
Method for characterizing extracellular proteins from the cell wall proteome of the copper tolerant fungus Phialophora malorum 2019 Laboratoř strukturní biologie a buněčné signalizace Daniel G.Volc J.Halada P.Karunasekera H.Kim J.International Biodeterioration & Biodegradation. 2019; 144(OCT 2019); UNSP 10476910.1016/j.ibiod.2019.104769
Differentially Expressed Mitochondrial Proteins in Human MCF7 Breast Cancer Cells Resistant to Paclitaxel 2019 Laboratoř strukturní biologie a buněčné signalizace Daniel P.Halada P.Jelínek M.Balušíková K.Kovář J.International Journal of Molecular Sciences. 2019; 20(12); 298610.3390/ijms20122986
The flavonoid degrading fungus Acremonium sp. DSM 24697 produces two diglycosidases with different specificities 2019 Laboratoř biotransformacíWeiz G.Mazzaferro L.Kotík M.Neher B.Halada P.Křen V.Breccia J.Applied Microbiology and Biotechnology. 2019; 103(23-24); 9493-950410.1007/s00253-019-10180-y
A novel MALDI-TOF MS-based method for blood meal identification in insect vectors: A proof of concept study on phlebotomine sand flies 2019 Laboratoř strukturní biologie a buněčné signalizace Hlaváčková K.Dvořák V.Chaskopoulou A.Volf P.Halada P.PLoS Neglected Tropical Diseases. 2019; 13(9); e000766910.1371/journal.pntd.0007669
A Photosynthesis-Specific Rubredoxin-Like Protein Is Required for Efficient Association of the D1 and D2 Proteins during the Initial Steps of Photosystem II Assembly 2019 Laboratoř strukturní biologie a buněčné signalizace Kiss E.Knoppová J.Aznar G.Pilný J.Yu J.Halada P.Nixon P.Sobotka R.Komenda J.Plant Cell. 2019; 31(2); 2241-225810.1105/tpc.19.00155
Updates on the distribution and diversity of sand flies (Diptera: Psychodidae) in Romania 2019 Laboratoř strukturní biologie a buněčné signalizace Cazan C.Pastrav I.Ionica A.Oguz G.Kasap O.Dvořák V.Halada P.Dumitrache M.Volf P.Alten B.Mihalca A.Parasites & Vectors. 2019; 12(MAY 20); 24710.1186/s13071-019-3507-7
Stearate-Induced Apoptosis in Human Pancreatic beta-Cells is Associated with Changes in Membrane Protein Expression and These Changes are Inhibited by Oleate 2019 Laboratoř strukturní biologie a buněčné signalizace Němcová?Fürstová V.Balušíková K.Halada P.Pavlíková N.Šrámek J.Kovář J.Proteomics Clinical Applications. 2019; 13(4); 180010410.1002/prca.201800104
Microtubular and Nuclear Functions of gamma-Tubulin: Are They LINCed? 2019 Laboratoř regulace genové expreseChumová J.Kourová H.Trögelová L.Halada P.Binarová P.Cells. 2019; 8(3); 25910.3390/cells8030259
