Journal of Natural Products. 2024; 87(7); 1860-1871
doc. Mgr. Miroslav Kolařík, Ph.D.
Head of Laboratory
Publication
FUNGAL BIOLOGY REVIEWS. 2024; 49(September 24); 100367
Taxol is NOT produced sustainably by endophytic fungi ! – A case study for the damage that scientific papermills can cause for the scientific communities
Microbiology Spectrum. 2024; 12(1); e0283023
Mycobiomes of two distinct clades of ambrosia gall midges (Diptera: Cecidomyiidae) are species-specific in larvae but similar in nutritive mycelia
Microbiology Spectrum. 2024; 12(1); 0299423
Concentration-dependent effect of plant secondary metabolites on bacterial and fungal microbiomes in caterpillar guts
Mycological Progress. 2024; 23(1); 5
Unraveling intragenomic polymorphisms in the high-quality genome of Hypoxylaceae: a comprehensive study of the rDNA cistron
Microorganisms. 2024; 12(8); 1714
Etiology of Foliar Blight of Indian Paintbrush (Castilleja tenuiflora) in Mexico
Czech Mycology. 2024; 76(1); 33-44
Surprising discovery of Sedecula pulvinata in Central Europe – is it really a species endemic to the western USA?
Mycosphere. 2023; 14(1); 1960-2012
Global consortium for the classification of fungi and fungus-like taxa
Studies in Mycology. 2023; 106(1); 39
In search of lost ergots: phylogenetic re-evaluation of Claviceps species in Japan and their biogeographic patterns revealed
New Phytologist. 2023; 240(5); 2151-2163
GlobalAMFungi: a global database of arbuscular mycorrhizal fungal occurrences from high-throughput sequencing metabarcoding studies
Folia Microbiologica. 2023; 68(June 8); 961-975
Taxonomic analysis reveals host preference of rare fungi in endophytes of Vitis vinifera from the Czech Republic
Fungal Diversity. 2023; 122(November 2023); 161-403
Fungal diversity notes 1611–1716: taxonomic and phylogenetic contributions on fungal genera and species emphasis in south China
Microbiology Spectrum. 2023; 11(1); 03160-22
Seasonal Shifts in Bacterial and Fungal Microbiomes of Leaves and Associated Leaf-Mining Larvae Reveal Persistence of Core Taxa Regardless of Diet
FEMS Microbiology Ecology. 2023; 99(8); fiad072
Proportions of taxa belonging to the gut core microbiome change throughout the life cycle and season of the bark beetle Ips typographus
Persoonia. 2023; 50(June 2023); 27-47
Wild rodents harbour high diversity ofi Arthroderma/i
Environmental Microbiome. 2023; 18(1); 64
Microbiome specificity and fluxes between two distant plant taxa in Iberian forests
Environmental Microbiome. 2023; 18(1); 53
New insight into the bark beetle ips typographus bacteriome reveals unexplored diversity potentially beneficial to the host
Journal of Fungi. 2023; 9(4); 463
Amesia hispanica sp. nov.; Producer of the Antifungal Class of Antibiotics Dactylfungins
Plant Biosystems. 2023; 157(2); 286-293
Taxonomy and phylogeny of Paramarasmius gen. nov. and Paramarasmius mesosporus; a worldwide distributed fungus with a strict ecological niche
Frontiers in Microbiology. 2023; 14(April 2 2023); 1108975
Insight into the genomes of dominant yeast symbionts of European spruce bark beetle; Ips typographus
Mycological Progress. 2023; 22(4); 32
Geosmithia-widespread and abundant but long ignored bark beetle symbionts
BMC Veterinary Research. 2023; 19(1); 40
Higher white-nose syndrome fungal isolate yields from UV-guided wing biopsies compared with skin swabs and optimal culture media
MicrobiologyOpen. 2022; 11(3); e1286
Characterization and microsatellite marker development for a common bark and ambrosia beetle associate; Geosmithia obscura
Studies in Mycology. 2022; 103(December); 87-212
Consolidation of Chloridium: new classification into eight sections with 37 species and reinstatement of the genera Gongromeriza and Psilobotry
Studies in Mycology. 2022; 102(November 16); 53-93
Taxonomy of Aspergillus series Versicolores: species reduction and lessons learned about intraspecific variability
Fungal Biology. 2022; 126(11-12); 752-763
Pre-invasion assessment on African invasive grasses revealed five new species of ergot fungi; Claviceps section Pusillae
Mycotaxon. 2022; 137(1); 73-87
Neotypification of Claviceps humidiphila and recognition of C. bavariensis sp. nov.
Canadian Journal of Plant Pathology. 2022; 44(June 2022); 783-792
The 168-year taxonomy of Claviceps in the light of variations: From three morphological species to four sections based on multigene phylogenies
Studies in Mycology. 2022; 102(November 2022); 1-51
A monograph of Aspergillus section Candidi
ChemMedChem. 2022; 17(21); e202200385
Piperazine-Modified Ketoconazole Derivatives Show Increased Activity against Fungal and Trypanosomatid Pathogens
Persoonia. 2022; 48(JUL 2022); 261-371
Fungal Planet description sheets: 1383-1435
Scientific Reports. 2022; 12(1); 15552
Fungi are more transient than bacteria in caterpillar gut microbiomes
Journal of Allergy and Clinical Immunology. 2022; 149(4); 1464-+); 17
A re-assessment of Taxomyces andreanae; the alleged taxol-producing fungus; using comparative genomics
Persoonia. 2022; 48(June 2022); 203-218
Host-driven subspeciation in the hedgehog fungus; Trichophyton erinacei; an emerging cause of human dermatophytosis
In: NOVOTNÝ; J.; MAREK; R.; eds. 35th NMR Valtice. Central European NMR Meeting. Brno: Tribun EU; 2022; C27
NMR Structure elucidation of quambalarines
Frontiers in Microbiology. 2022; 13(MAR 14); 820402
Geosmithia Species Associated With Bark Beetles From China; With the Description of Nine New Species
Phytopathology. 2022; 112(2); 261-270
Preinvasion Assessment of Exotic Bark Beetle-Vectored Fungi to Detect Tree-Killing Pathogens
Mycological Progress. 2022; 21(1); 327-343
Towards consolidation of Gymnopilus taxonomy: the case of G. stabilis; G. sapineus; and G. penetrans
Journal of Fungi. 2021; 7(12); 1097
Phylogenetic reassessment; taxonomy; and biogeography of codinaea and similar fungi
Agriculture-Basel. 2021; 11(12); 1250
Fungal Endophytes of Vitis vinifera-Plant Growth Promotion Factors
Sydowia. 2021; 73(2021); 245-256
Polyporus tubaeformis (Basidiomycota; Polyporaceae) identity; ecology and distribution in the Czech Republic; Austria; Slovakia and Ukraine
Studies in Mycology. 2021; 99(June 2021); 100120
Re-examination of species limits in Aspergillus section Flavipedes using advanced species delimitation methods and description of four new species
Microbiology Spectrum. 2021; 9(2); e00284-21
Discovery of New Trichophyton Members; T. persicum and T. spiraliforme spp. nov.; as a Cause of Highly Inflammatory Tinea Cases in Iran and Czechia
Journal of Fungi. 2021; 7(9); 684
An Outbreak of Trichophyton quinckeanum Zoonotic Infections in the Czech Republic Transmitted from Cats and Dogs
Plant Systematics and Evolution. 2021; 307(3); 38
Taxonomic revision of the acidophilic genus Acidiella (Dothideomycetes; Capnodiales) with a description of new species from Poland
Mycologia. 2021; 113(2); 390-433
Delimitation and phylogeny of Dictyochaeta; and introduction of Achrochaeta and Tubulicolla; genera nova
Microorganisms. 2021; 9(4); 706
Phylogeny; global biogeography and pleomorphism of Zanclospora
Antonie van Leeuwenhoek International Journal of General and Molecular Microbiology. 2021; 114(2); 169-194
Geosmithia associated with hardwood-infesting bark and ambrosia beetles; with the description of three new species from Poland
Applied and Environmental Microbiology. 2021; 87(2); e02042-20
Termites Are Associated with External Species-Specific Bacterial Communities
Journal of Natural Products. 2021; 84(1); 46-55
NMR Structure Elucidation of Naphthoquinones from Quambalaria cyanescens
Folia Microbiologica. 2020; 65(6); 1025-1032
Clinical and histopathological changes in rainbow trout Oncorhynchus mykiss experimentally infected with fungus Bradymyces oncorhynchi
Fungal Diversity. 2020; 104(1); 333-387
Resolving the taxonomy of emerging zoonotic pathogens in the Trichophyton benhamiae complex
Microorganisms. 2020; 8(10); 1472
Novel Insights into the Effect of Pythium Strains on Rapeseed Metabolism
FEMS Microbiology Ecology. 2020; 96(9); fiaa116
Caterpillar gut and host plant phylloplane mycobiomes differ: a new perspective on fungal involvement in insect guts
Fungal Ecology. 2020; 48(DEC 2020); 100991
Termites host specific fungal communities that differ from those in their ambient environments
Persoonia. 2020; 44(JUL 2020); 301-459
Fungal Planet description sheets: 1042-1111
Scientific Reports. 2020; 10(1); 16530
Comparative eco-physiology revealed extensive enzymatic curtailment; lipases production and strong conidial resilience of the bat pathogenic fungus
Scientific Data. 2020; 7(1); 228
GlobalFungi; a global database of fungal occurrences from high-throughput-sequencing metabarcoding studies
Mycological Progress. 2020; 19(3); 235-245
Intragenomic polymorphisms in the ITS region of high-quality genomes of the Hypoxylaceae (Xylariales; Ascomycota)
Mycologia. 2020; 112(2); 342-370
Increasing the species diversity in the Aspergillus section Nidulantes: Six novel species mainly from the indoor environment
Data in Brief. 2019; 27(DEC 2019); 104568
Fungal metabolic profile dataset was not influenced by long-term in vitro preservation of strains
Klinická mikrobiologie a infekční lékařství. 2019; 25(2); 48-52
Kryptické druhy aspergilů – případ chronické kavitující plicní infekce vyvolané Aspergillus lentulus u pacienta po transplantaci srdce\n
Persoonia. 2019; 43(Dec 2019); 223-425
Fungal Planet description sheets: 951–1041
Czech Mycology. 2019; 71(2); 137-150
Příspěvek k poznání mykobioty středoevropských suchých trávníků: Phaeoclavulina clavarioides a Phaeoclavulina roellinii (Gomphales)
Fungal Ecology. 2019; 41(OCT 2019); 165-176
Adaptive traits of bark and ambrosia beetle-associated fungi
Trends in Ecology & Evolution. 2019; 34(10); 914-924
Bark Beetle Population Dynamics in the Anthropocene: Challenges and Solutions
Fungal Ecology. 2019; 39(JUN 2019); 168-183
Geosmithia species in southeastern USA and their affinity to beetle vectors and tree hosts
Toxins. 2019; 11(8); 439
Ergochromes: Heretofore Neglected Side of Ergot Toxicity
Frontiers in Immunology. 2019; 10(JUN 18); 1277
Developmental and Immune Role of a Novel Multiple Cysteine Cluster TLR From Eisenia andrei Earthworms
Czech Mycology. 2019; 71(1); 1-32
Butyriboletus regius and Butyriboletus fechtneri: typification of two well-known species
Mycological Progress. 2019; 18(3); 321-334
Tricholomopsis badinensis sp. nov. and T. sulphureoidestwo rare fungi of European old-growth forests
Fungal Biology. 2019; 123(6); 431-447
Taxonomic update of Clitocybula sensu lato with a new generic classification
Mycological Progress. 2019; 18(1-2); 215-228