Journal of Biological Chemistry. 2024; 300(6); 107339
doc. Mgr. Libor Krásný, Ph.D.
Head of Laboratory
Publication
Proteomics. 2024; č. článku 2400031
Whole proteome analysis of germinating and outgrowing Bacillus subtilis 168
Nucleic Acids Research. 2024; 52(12); 7305-7320); gkae434
Structural characterization of two prototypical repressors of SorC family reveals tetrameric assemblies on DNA and mechanism of function.
Nucleic Acids Research. 2024; 52(May 8); 4604-4626
RIP-seq reveals RNAs that interact with RNA polymerase and primary sigma factors in bacteria
Communications Biology. 2024; 7(January 6); 46
SigE of Streptomyces coelicolor can function both as a direct activator or repressor of transcription
Czech Chem. Soc. Symp. Series. 2023; 21(5); 210-210
A new role of sigma factors in regulation of bacterial transcription
Lipophosphonoxins; their preparation and use
Czech Chemical Society Symposium Series. 2023; 21(5); 179
Design and synthesis of new molecular tools to probe cytosolic proteins in bacteria resistant to rifamycin antibiotics
Journal of Bacteriology. 2023; 205(10); e0011223
The alternative sigma factor SigN of Bacillus subtilis is intrinsically toxic
FEMS Microbiology Reviews. 2023; 47(6); fuac051
What the Hel: recent advances in understanding rifampicin resistance in bacteria
Proteins-Structure; Function and Bioinformatics. 2023; 91(9); 1276-1287
Characterization of a transitionally occupied state and thermal unfolding of domain 1.1 of s(A) factor of RNA polymerase from Bacillus subtilis
Czech Chemical Society Symposium Series. 2022; 20(6); 380-380
Bacterial resistance to rifampicin by its modifications
Czech Chemical Society Symposium Series. 2022; 20(6); 347-347
Novel antibacterial compound lipophosphonoxins: design; synthesis; evaluation; and applications
Journal of Medicinal Chemistry. 2022; 65(14); 10045-10078
LEGO-Lipophosphonoxins: A Novel Approach in Designing Membrane Targeting Antimicrobials
ACS Chemical Biology. 2022; 17(10); 2781-2788
Epigenetic Pyrimidine Nucleotides in Competition with Natural dNTPs as Substrates for Diverse DNA Polymerases
Frontiers in Microbiology. 2022; 13(MAY 11 2022); 848536
Ms1 RNA Interacts With the RNA Polymerase Core in Streptomyces coelicolor and Was Identified in Majority of Actinobacteria Using a Linguistic Gene Synteny Search
Chemistry - A European Journal. 2022; 28(31); e202200911
Glucosylated 5-Hydroxymethylpyrimidines as Epigenetic DNA Bases Regulating Transcription and Restriction Cleavage
Lipofosfonoxiny třetí generace; jejich příprava a použití
Nucleic Acids Research. 2021; 49(18); 10221-10234
Critical Reviews and Perspectives beta-CASP proteins removing RNA polymerase from DNA: when a torpedo is needed to shoot a sitting duck
Scientific Reports. 2021; 11(Sep); 17688
Novel lipophosphonoxin-loaded polycaprolactone electrospun nanofiber dressing reduces Staphylococcus aureus induced wound infection in mice
Nucleic Acids Research. 2021; 49(12); 7088-7102
Quasi-essentiality of RNase Y in Bacillus subtilis is caused by its critical role in the control of mRNA homeostasis
FEBS Open Bio. 2021; 11(Suppl 1); 18
NAD-capping: a universal RNA modification in Mycobacteria; Archaea and Escherichia coli
Microorganisms. 2021; 9(1); 87
Effects of DNA Topology on Transcription from rRNA Promoters in Bacillus subtilis
Nature Communications. 2020; 11(1); 6419
Mycobacterial HelD is a nucleic acids-clearing factor for RNA polymerase
Organic Letters. 2020; 22(22); 9081-9085
Photocaged 5-(Hydroxymethyl)pyrimidine Nucleoside Phosphoramidites for Specific Photoactivatable Epigenetic Labeling of DNA
Nature Communications. 2020; 11(1); 4963
Bacterial nanotubes as a manifestation of cell death
Lipofosfonoxiny druhé generace a jejich použití
PLoS Genetics. 2020; 16(3); e1008275
The alarmones (p)ppGpp are part of the heat shock response of Bacillus subtilis
EMBO Journal. 2020; 39(3); e102500
The torpedo effect in Bacillus subtilis: RNase J1 resolves stalled transcription complexes
ACS Omega. 2020; 5(7); 3165-3171
Evaluation of Second-Generation Lipophosphonoxins as Antimicrobial Additives in Bone Cement
Nature Communications. 2020; 11(Feb 26); 1052
Dinucleoside polyphosphates act as 5?-RNA caps in bacteria
Lipophosphonoxins of second generation; and their use
Journal of the American Chemical Society. 2019; 141(42); 16817-16828
Quantitative Conformational Analysis of Functionally Important Electrostatic Interactions in the Intrinsically Disordered Region of Delta Subunit of Bacterial RNA Polymerase
Talanta. 2019; 205(Dec 1); 120161
Analysis of nucleotide pools in bacteria using HPLC-MS in HILIC mode
Chemical Science. 2019; 10(14); 3937-3942
Switching transcription with bacterial RNA polymerase through photocaging; photorelease and phosphorylation reactions in the major groove of DNA
FEBS Letters. 2019; 593(9); 996-1005
Domain structure of HelD; an interaction partner of Bacillus subtilis RNA polymerase
Molecular Microbiology. 2019; 111(2); 354-372
Ms1 RNA increases the amount of RNA polymerase in Mycobacterium smegmatis
Journal of Bacteriology. 2019; 201(4); e00583
The Core and Holoenzyme Forms of RNA Polymerase from Mycobacterium smegmatis
Molecular Microbiology. 2019; 111(2); 514-533